Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine--trna ligase subunit beta | EDI29_12895 | Not Available | Positive | 2837124 - 2839193 | 76162.2 |
| duf3053 domain-containing protein | EDI29_12900 | Not Available | Positive | 2839489 - 2840193 | 25726.8 |
| pts mannitol transporter subunit iicba | EDI29_12905 | Not Available | Positive | 2840694 - 2842601 | 67317.6 |
| mannitol-1-phosphate 5-dehydrogenase | EDI29_12910 | Not Available | Positive | 2842663 - 2843811 | 41498.7 |
| mltr family transcriptional regulator | EDI29_12915 | Not Available | Positive | 2843966 - 2844496 | 19571.9 |
| yibl family ribosome-associated protein | EDI29_12920 | Not Available | Positive | 2844646 - 2845008 | 13505.6 |
| hamp domain-containing protein | EDI29_12925 | Not Available | Negative | 2845105 - 2846997 | 68517.4 |
| superoxide dismutase | EDI29_12930 | Not Available | Negative | 2847398 - 2848024 | 22953.9 |
| formate dehydrogenase accessory sulfurtransferase fdhd | EDI29_12935 | Not Available | Negative | 2848283 - 2849116 | 29967.0 |
| aldehyde dehydrogenase | EDI29_12940 | Not Available | Positive | 2849337 - 2850872 | 55975.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
