Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase sulfur acceptor subunit csde | EDI29_00420 | Not Available | Negative | 89863 - 90318 | 16564.8 |
| cysteine desulfurase csda | EDI29_00425 | Not Available | Negative | 90322 - 91527 | 43469.8 |
| ygdi/ygdr family lipoprotein | EDI29_00430 | Not Available | Positive | 91711 - 91932 | 8032.62 |
| transcriptional regulator gcva | EDI29_00435 | Not Available | Positive | 92656 - 93579 | 34549.4 |
| duf423 domain-containing protein | EDI29_00440 | Not Available | Positive | 93654 - 94049 | 14548.3 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | EDI29_00445 | Not Available | Positive | 94042 - 95142 | 42118.8 |
| flap endonuclease xni | EDI29_00450 | Not Available | Negative | 95196 - 95978 | 28770.4 |
| log family protein | EDI29_00455 | Not Available | Negative | 96044 - 97408 | 50371.0 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | EDI29_00460 | Not Available | Negative | 97719 - 98567 | 32328.0 |
| secy-interacting protein | EDI29_00465 | Not Available | Positive | 98638 - 99186 | 20158.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
