Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rele/pare family toxin | EDI29_12790 | Not Available | Negative | 2815559 - 2815846 | 11155.9 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | EDI29_12795 | Not Available | Negative | 2815843 - 2816094 | 9132.05 |
| siderophore-interacting protein | EDI29_12800 | Not Available | Positive | 2816352 - 2817257 | 33593.5 |
| thiol:disulfide interchange protein dsbg | EDI29_12805 | Not Available | Negative | 2817292 - 2818047 | 27826.4 |
| hypothetical protein | EDI29_12810 | Not Available | Positive | 2818248 - 2818787 | 20009.2 |
| lyse family translocator | EDI29_12815 | Not Available | Positive | 2818837 - 2819460 | 22726.5 |
| hypothetical protein | EDI29_12825 | Not Available | Negative | 2820147 - 2820584 | 15524.4 |
| alkylhydroperoxidase domain protein | EDI29_12830 | Not Available | Negative | 2820976 - 2822109 | 41832.2 |
| putative fmn-dependent luciferase-like monooxygenase | EDI29_12835 | Not Available | Negative | 2822106 - 2823140 | 37015.1 |
| abc transporter atp-binding protein | EDI29_12840 | Not Available | Negative | 2823142 - 2824839 | 62149.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
