Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-tyrosyl-trna(tyr) deacylase | EDI29_12640 | Not Available | Positive | 2776471 - 2776908 | 15850.0 |
| gnat family n-acetyltransferase | EDI29_12645 | Not Available | Positive | 2776996 - 2777937 | 34741.7 |
| asma family protein | EDI29_12650 | Not Available | Negative | 2778101 - 2779792 | 62308.8 |
| uracil-xanthine permease | EDI29_12655 | Not Available | Negative | 2779950 - 2781338 | 48909.2 |
| atp-dependent dna helicase recg | EDI29_12660 | Not Available | Negative | 2781628 - 2783709 | 76631.9 |
| trna (guanosine(18)-2'-o)-methyltransferase trmh | EDI29_12665 | Not Available | Negative | 2783709 - 2784401 | 25809.1 |
| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase | EDI29_12670 | Not Available | Negative | 2784407 - 2786506 | 79108.1 |
| dna-directed rna polymerase subunit omega | EDI29_12675 | Not Available | Negative | 2786525 - 2786800 | 10269.2 |
| guanylate kinase | EDI29_12680 | Not Available | Negative | 2786854 - 2787477 | 23511.1 |
| nad-dependent dna ligase ligb | EDI29_12685 | Not Available | Positive | 2787797 - 2789488 | 63758.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
