Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tail fiber protein | EDI29_12380 | Not Available | Negative | 2728644 - 2729066 | 15425.9 |
| site-specific integrase | EDI29_12385 | Not Available | Positive | 2729177 - 2730307 | 42364.6 |
| hypothetical protein | EDI29_12390 | Not Available | Positive | 2730397 - 2730846 | 17302.1 |
| hypothetical protein | EDI29_12395 | Not Available | Negative | 2731311 - 2731361 | 1646.96 |
| conjugal transfer protein traf | EDI29_12400 | Not Available | Positive | 2731954 - 2733153 | 42158.7 |
| duf2786 domain-containing protein | EDI29_12405 | Not Available | Positive | 2733217 - 2733909 | 26143.0 |
| hypothetical protein | EDI29_12410 | Not Available | Negative | 2734236 - 2734979 | 27652.0 |
| hypothetical protein | EDI29_12415 | Not Available | Positive | 2735317 - 2736198 | 32884.9 |
| tigr03759 family integrating conjugative element protein | EDI29_12420 | Not Available | Positive | 2736208 - 2736921 | 26425.4 |
| lytic transglycosylase domain-containing protein | EDI29_12425 | Not Available | Positive | 2736921 - 2737505 | 22002.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
