Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate synthase | EDI29_00375 | Not Available | Negative | 77879 - 78796 | 33094.4 |
| tetr/acrr family transcriptional regulator | EDI29_00380 | Not Available | Negative | 78840 - 79541 | 25745.1 |
| amidohydrolase | EDI29_00385 | Not Available | Negative | 79626 - 80879 | 44804.6 |
| abc transporter atp-binding protein | EDI29_00390 | Not Available | Negative | 80872 - 82599 | 63591.2 |
| abc transporter permease | EDI29_00395 | Not Available | Negative | 82596 - 83531 | 33027.6 |
| abc transporter permease | EDI29_00400 | Not Available | Negative | 83533 - 84519 | 35857.1 |
| abc transporter substrate-binding protein | EDI29_00405 | Not Available | Negative | 84573 - 86159 | 58781.9 |
| asp-trna(asn)/glu-trna(gln) amidotransferase gatcab subunit c | EDI29_00410 | Not Available | Positive | 86683 - 88941 | 83755.0 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | EDI29_00415 | Not Available | Positive | 89008 - 89820 | 28951.8 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 89043 - 89421 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
