Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| piln family type ivb pilus formation outer membrane protein | EDI29_12325 | Not Available | Positive | 2718259 - 2719923 | 59194.9 |
| hypothetical protein | EDI29_12330 | Not Available | Positive | 2719934 - 2721232 | 47161.1 |
| type iv pilus biogenesis protein pilp | EDI29_12335 | Not Available | Positive | 2721229 - 2721738 | 18139.9 |
| pilus assembly protein | EDI29_12340 | Not Available | Positive | 2721738 - 2723297 | 57835.7 |
| pilus assembly protein | EDI29_12345 | Not Available | Positive | 2723300 - 2724466 | 43304.9 |
| pilus assembly protein pilx | EDI29_12350 | Not Available | Positive | 2724523 - 2725119 | 20581.7 |
| pilus assembly protein | EDI29_12355 | Not Available | Positive | 2725125 - 2725643 | 19181.4 |
| potassium transporter trkg | EDI29_12360 | Not Available | Positive | 2725640 - 2726293 | 24026.5 |
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | EDI29_12365 | Not Available | Positive | 2726307 - 2727905 | 56449.2 |
| tail fiber protein | EDI29_12375 | Not Available | Negative | 2728183 - 2728572 | 14017.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
