Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDI29_12275 | Not Available | Positive | 2708612 - 2708866 | 10072.1 |
| helix-turn-helix domain-containing protein | EDI29_12280 | Not Available | Positive | 2709038 - 2710231 | 44631.6 |
| tigr03761 family integrating conjugative element protein | EDI29_12285 | Not Available | Positive | 2710549 - 2711343 | 29077.6 |
| dna topoisomerase iii | EDI29_12290 | Not Available | Positive | 2711343 - 2713373 | 75488.2 |
| duf3577 domain-containing protein | EDI29_12295 | Not Available | Positive | 2714001 - 2714498 | 17811.8 |
| single-stranded dna-binding protein | EDI29_12300 | Not Available | Positive | 2714563 - 2715111 | 19719.2 |
| hypothetical protein | EDI29_12305 | Not Available | Positive | 2715215 - 2715799 | 22342.9 |
| duf29 domain-containing protein | EDI29_12310 | Not Available | Positive | 2715872 - 2716309 | 16759.6 |
| pilus assembly protein | EDI29_12315 | Not Available | Positive | 2716460 - 2717803 | 47431.1 |
| pilus assembly protein | EDI29_12320 | Not Available | Positive | 2717803 - 2718249 | 15965.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
