Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr00730 family rossman fold protein | EDI29_12165 | Not Available | Positive | 2694745 - 2695311 | 20641.9 |
| hypothetical protein | EDI29_12170 | Not Available | Negative | 2695467 - 2696018 | 19815.6 |
| voc family protein | EDI29_12175 | Not Available | Negative | 2696238 - 2696639 | 14980.0 |
| tetr/acrr family transcriptional regulator | EDI29_12180 | Not Available | Negative | 2696725 - 2697297 | 21618.0 |
| hpp family protein | EDI29_12185 | Not Available | Positive | 2697430 - 2697963 | 18561.2 |
| hypothetical protein | EDI29_12195 | Not Available | Positive | 2698304 - 2698516 | 8209.99 |
| gnat family n-acetyltransferase | EDI29_12200 | Not Available | Negative | 2699269 - 2699775 | 18414.9 |
| duf1778 domain-containing protein | EDI29_12205 | Not Available | Positive | 2700271 - 2700564 | 10928.1 |
| gnat family n-acetyltransferase | EDI29_12210 | Not Available | Positive | 2700561 - 2701055 | 17615.7 |
| type ii toxin-antitoxin system antitoxin ccda | EDI29_12220 | Not Available | Negative | 2701323 - 2701541 | 8220.65 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
