Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfurtransferase | EDI29_12055 | Not Available | Negative | 2672114 - 2672983 | 31734.5 |
| amino acid abc transporter atp-binding protein | EDI29_12060 | Not Available | Negative | 2673003 - 2673752 | 27341.4 |
| amino acid abc transporter permease | EDI29_12065 | Not Available | Negative | 2673752 - 2674465 | 25944.8 |
| amino acid abc transporter permease | EDI29_12070 | Not Available | Negative | 2674462 - 2675211 | 27982.7 |
| abc transporter substrate-binding protein | EDI29_12075 | Not Available | Negative | 2675214 - 2676038 | 30472.5 |
| iclr family transcriptional regulator | EDI29_12080 | Not Available | Positive | 2676244 - 2677029 | 28365.2 |
| cystathionine beta-lyase | EDI29_12085 | Not Available | Positive | 2677218 - 2678387 | 42821.1 |
| capa family protein | EDI29_12090 | Not Available | Positive | 2678444 - 2679772 | 47962.6 |
| lysr family transcriptional regulator | EDI29_12095 | Not Available | Positive | 2680000 - 2680893 | 32576.4 |
| pyridoxal phosphate-dependent aminotransferase | EDI29_12100 | Not Available | Positive | 2680982 - 2682142 | 41774.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
