Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | EDI29_11955 | Not Available | Negative | 2649716 - 2650594 | 32655.1 |
| multidrug/biocide efflux pace transporter | EDI29_11960 | Not Available | Positive | 2650735 - 2651205 | 18088.7 |
| dna-3-methyladenine glycosylase 2 family protein | EDI29_11965 | Not Available | Negative | 2651215 - 2651877 | 24987.0 |
| translation factor (sua5) | EDI29_11970 | Not Available | Negative | 2651991 - 2652770 | 28901.7 |
| bifunctional dna-binding transcriptional regulator/o6-methylguanine-dna methyltransferase ada | EDI29_11975 | Not Available | Positive | 2653046 - 2654176 | 41551.0 |
| dna oxidative demethylase alkb | EDI29_11980 | Not Available | Positive | 2654173 - 2654829 | 24167.0 |
| d-galactonate dehydratase family protein | EDI29_11985 | Not Available | Positive | 2655154 - 2656368 | 45684.6 |
| mfs transporter | EDI29_11990 | Not Available | Positive | 2656479 - 2657813 | 48296.6 |
| mannitol dehydrogenase family protein | EDI29_11995 | Not Available | Positive | 2657870 - 2659336 | 54117.9 |
| gntr family transcriptional regulator | EDI29_12000 | Not Available | Positive | 2659427 - 2660113 | 26276.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
