Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | EDI29_11755 | Not Available | Positive | 2605117 - 2605377 | 9895.03 |
| xre family transcriptional regulator | EDI29_11760 | Not Available | Positive | 2605481 - 2605741 | 9912.9 |
| is110 family transposase | EDI29_11765 | Not Available | Positive | 2605769 - 2606566 | 29416.7 |
| hypothetical protein | EDI29_11770 | Not Available | Negative | 2606632 - 2606820 | 7237.32 |
| tryptophan permease | EDI29_11775 | Not Available | Positive | 2607016 - 2608290 | 46165.4 |
| yaii/yqxd family protein | EDI29_11780 | Not Available | Negative | 2608370 - 2608822 | 16923.3 |
| oxygen-dependent coproporphyrinogen oxidase | EDI29_11785 | Not Available | Negative | 2608826 - 2609758 | 35300.4 |
| gnat family acetyltransferase | EDI29_11790 | Not Available | Positive | 2609940 - 2610365 | 16323.6 |
| hypothetical protein | EDI29_11795 | Not Available | Positive | 2610481 - 2611143 | 24694.2 |
| hypothetical protein | EDI29_11800 | Not Available | Positive | 2611136 - 2611837 | 26429.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
