Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase family protein | EDI29_11650 | Not Available | Positive | 2584399 - 2585394 | 37620.1 |
| lysr family transcriptional regulator | EDI29_11655 | Not Available | Negative | 2585453 - 2586349 | 33517.7 |
| pirin family protein | EDI29_11660 | Not Available | Positive | 2586465 - 2587163 | 25815.6 |
| transcriptional regulator zur | EDI29_11665 | Not Available | Positive | 2587270 - 2587779 | 19113.7 |
| repressor lexa | EDI29_11670 | Not Available | Negative | 2587810 - 2588418 | 22318.1 |
| diacylglycerol kinase | EDI29_11675 | Not Available | Negative | 2588528 - 2588893 | 13112.4 |
| glycerol-3-phosphate 1-o-acyltransferase plsb | EDI29_11680 | Not Available | Positive | 2589021 - 2591489 | 93064.3 |
| 4-hydroxybenzoate octaprenyltransferase | EDI29_11685 | Not Available | Negative | 2591629 - 2592492 | 31757.8 |
| chorismate lyase | EDI29_11690 | Not Available | Negative | 2592505 - 2593038 | 20380.3 |
| chaperonin groel | EDI29_11695 | Not Available | Negative | 2593423 - 2595069 | 57094.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
