Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-independent periplasmic protein-refolding chaperone | EDI29_11550 | Not Available | Negative | 2563877 - 2564365 | 18100.9 |
| hypothetical protein | EDI29_11555 | Not Available | Negative | 2564638 - 2564934 | 11618.9 |
| nadph-dependent 2,4-dienoyl-coa reductase | EDI29_11560 | Not Available | Positive | 2565150 - 2567204 | 74432.8 |
| 23s rrna (guanine(1835)-n(2))-methyltransferase rlmg | EDI29_11565 | Not Available | Negative | 2567346 - 2568485 | 42202.8 |
| gfo/idh/moca family oxidoreductase | EDI29_11570 | Not Available | Positive | 2568647 - 2569645 | 36574.5 |
| terc family protein | EDI29_11575 | Not Available | Positive | 2569918 - 2570871 | 35605.9 |
| serine/threonine transporter sstt | EDI29_11580 | Not Available | Positive | 2571212 - 2572459 | 43391.3 |
| ygjv family protein | EDI29_11585 | Not Available | Negative | 2572532 - 2573062 | 19451.2 |
| altronate dehydratase | EDI29_11590 | Not Available | Negative | 2573151 - 2574641 | 54567.1 |
| tagaturonate reductase | EDI29_11595 | Not Available | Negative | 2574661 - 2576127 | 55633.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
