Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | EDI29_11445 | Not Available | Positive | 2537694 - 2537957 | 9846.83 |
| malate dehydrogenase | EDI29_11450 | Not Available | Negative | 2538027 - 2538965 | 32413.4 |
| transcriptional regulator argr | EDI29_11455 | Not Available | Positive | 2539435 - 2539905 | 17167.7 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | EDI29_11460 | Not Available | Negative | 2539974 - 2540987 | 35859.1 |
| 30s ribosomal protein s21 | EDI29_11465 | Not Available | Positive | 2541215 - 2541430 | 8500.42 |
| dna primase | EDI29_11470 | Not Available | Positive | 2541583 - 2543337 | 66346.6 |
| rna polymerase sigma factor rpod | EDI29_11475 | Not Available | Positive | 2543492 - 2545327 | 70108.0 |
| g/u mismatch-specific dna glycosylase | EDI29_11480 | Not Available | Negative | 2545410 - 2545913 | 18750.5 |
| Trna-met | Not Available | Not Available | Positive | 2546054 - 2546129 | Not Available |
| lysr family transcriptional regulator | EDI29_11490 | Not Available | Negative | 2546232 - 2547134 | 33233.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
