Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prolipoprotein diacylglyceryl transferase | EDI29_00285 | Not Available | Positive | 54360 - 55226 | 32690.6 |
| thymidylate synthase | EDI29_00290 | Not Available | Positive | 55263 - 56057 | 30385.3 |
| prepilin peptidase-dependent protein | EDI29_00295 | Not Available | Positive | 56239 - 56742 | 18706.8 |
| prepilin peptidase-dependent protein | EDI29_00300 | Not Available | Positive | 56766 - 57377 | 23016.5 |
| duf2509 family protein | EDI29_00305 | Not Available | Positive | 57413 - 57829 | 15301.5 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | EDI29_00310 | Not Available | Positive | 57816 - 58211 | 15299.2 |
| exodeoxyribonuclease v subunit gamma | EDI29_00315 | Not Available | Positive | 58540 - 61938 | 130084.0 |
| Ncrna_class:antisense_rna | Not Available | Not Available | Positive | 59248 - 59359 | Not Available |
| pitrilysin | EDI29_00320 | Not Available | Positive | 62035 - 64971 | 109726.0 |
| exodeoxyribonuclease v subunit beta | EDI29_00325 | Not Available | Positive | 64968 - 68549 | 135094.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
