Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| u32 family peptidase | EDI29_11290 | Not Available | Positive | 2506925 - 2507920 | 37335.5 |
| u32 family peptidase | EDI29_11295 | Not Available | Positive | 2507932 - 2508810 | 33177.5 |
| luciferase-like monooxygenase | EDI29_11300 | Not Available | Positive | 2508975 - 2509982 | 36673.9 |
| dead/deah family atp-dependent rna helicase | EDI29_11305 | Not Available | Negative | 2510070 - 2511968 | 70509.4 |
| protein yrbn | EDI29_11310 | Not Available | Negative | 2511961 - 2512038 | 3009.61 |
| lipoprotein nlpi | EDI29_11315 | Not Available | Negative | 2512143 - 2513027 | 33659.9 |
| polyribonucleotide nucleotidyltransferase | EDI29_11320 | Not Available | Negative | 2513165 - 2515285 | 76378.5 |
| 30s ribosomal protein s15 | EDI29_11325 | Not Available | Negative | 2515536 - 2515805 | 10197.4 |
| trna pseudouridine(55) synthase trub | EDI29_11330 | Not Available | Negative | 2515928 - 2516872 | 35010.1 |
| 30s ribosome-binding factor rbfa | EDI29_11335 | Not Available | Negative | 2516872 - 2517270 | 14986.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
