Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | EDI29_11240 | Not Available | Positive | 2494847 - 2495389 | 20275.5 |
| duf4880 domain-containing protein | EDI29_11245 | Not Available | Positive | 2495401 - 2496363 | 36299.9 |
| tonb-dependent siderophore receptor | EDI29_11250 | Not Available | Positive | 2496484 - 2498979 | 92266.1 |
| abc transporter atp-binding protein/permease | EDI29_11255 | Not Available | Positive | 2499028 - 2500776 | 66767.1 |
| purine-nucleoside phosphorylase | EDI29_11260 | Not Available | Negative | 2500827 - 2501546 | 26094.5 |
| phosphopentomutase | EDI29_11265 | Not Available | Negative | 2501592 - 2502815 | 43980.9 |
| thymidine phosphorylase | EDI29_11270 | Not Available | Negative | 2502905 - 2504233 | 47298.0 |
| giy-yig nuclease family protein | EDI29_11275 | Not Available | Positive | 2505199 - 2505498 | 11291.6 |
| n-acetyltransferase | EDI29_11280 | Not Available | Negative | 2505510 - 2506052 | 19714.0 |
| scp2 domain-containing protein | EDI29_11285 | Not Available | Negative | 2506046 - 2506570 | 19742.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
