Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1435 domain-containing protein | EDI29_11190 | Not Available | Positive | 2489001 - 2489291 | 10354.5 |
| Trna-leu | Not Available | Not Available | Positive | 2489393 - 2489479 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 2489541 - 2489627 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 2489706 - 2489792 | Not Available |
| lysr family transcriptional regulator | EDI29_11210 | Not Available | Negative | 2489896 - 2490801 | 33990.2 |
| aldo/keto reductase | EDI29_11215 | Not Available | Positive | 2490915 - 2491907 | 36282.4 |
| 16s rrna (guanine(1207)-n(2))-methyltransferase rsmc | EDI29_11220 | Not Available | Negative | 2491913 - 2492956 | 37736.1 |
| dna polymerase iii subunit psi | EDI29_11225 | Not Available | Positive | 2493116 - 2493547 | 15941.1 |
| ribosomal-protein-alanine n-acetyltransferase | EDI29_11230 | Not Available | Positive | 2493498 - 2493941 | 16613.7 |
| discoidin domain-containing protein | EDI29_11235 | Not Available | Positive | 2494144 - 2494623 | 17471.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
