Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (guanosine(46)-n7)-methyltransferase trmb | EDI29_00235 | Not Available | Positive | 43103 - 43822 | 27166.9 |
| duf469 domain-containing protein | EDI29_00240 | Not Available | Positive | 43824 - 44168 | 13433.1 |
| duf2884 family protein | EDI29_00245 | Not Available | Positive | 44283 - 44996 | 26534.8 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 44374 - 44489 | Not Available |
| autotransporter domain-containing protein | EDI29_00250 | Not Available | Positive | 45203 - 48313 | 110224.0 |
| nadp(h)-dependent aldo-keto reductase | EDI29_00255 | Not Available | Negative | 48377 - 49417 | 38415.7 |
| ygdi/ygdr family lipoprotein | EDI29_00265 | Not Available | Negative | 49624 - 49830 | 7467.06 |
| dna mismatch repair endonuclease muth | EDI29_00270 | Not Available | Negative | 49952 - 50644 | 25509.7 |
| rna pyrophosphohydrolase | EDI29_00275 | Not Available | Positive | 51341 - 51874 | 20951.4 |
| phosphoenolpyruvate-protein phosphotransferase ptsp | EDI29_00280 | Not Available | Positive | 51887 - 54133 | 83550.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
