Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i secretion system permease/atpase | EDI29_10785 | Not Available | Negative | 2392303 - 2394141 | 65819.7 |
| hemophore hasa | EDI29_10790 | Not Available | Negative | 2394400 - 2395017 | 21056.1 |
| tonb-dependent receptor | EDI29_10795 | Not Available | Negative | 2395135 - 2397813 | 98738.2 |
| duf4880 domain-containing protein | EDI29_10800 | Not Available | Negative | 2398090 - 2399043 | 35383.1 |
| sigma-70 family rna polymerase sigma factor | EDI29_10805 | Not Available | Negative | 2399143 - 2399652 | 19579.3 |
| aminobutyraldehyde dehydrogenase | EDI29_10810 | Not Available | Positive | 2400436 - 2401860 | 50913.1 |
| putrescine aminotransferase | EDI29_10815 | Not Available | Positive | 2402162 - 2403592 | 51852.7 |
| hamp domain-containing protein | EDI29_10820 | Not Available | Positive | 2404392 - 2406053 | 59788.4 |
| hypothetical protein | EDI29_10825 | Not Available | Negative | 2406050 - 2406433 | 13985.5 |
| class i sam-dependent methyltransferase | EDI29_10830 | Not Available | Negative | 2406575 - 2407561 | 36090.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
