Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfonate abc transporter substrate-binding protein | EDI29_10735 | Not Available | Negative | 2380628 - 2381650 | 37212.3 |
| malate/lactate/ureidoglycolate dehydrogenase | EDI29_10740 | Not Available | Positive | 2381970 - 2382992 | 36825.8 |
| taurine abc transporter substrate-binding protein | EDI29_10745 | Not Available | Positive | 2383058 - 2384071 | 36017.9 |
| abc transporter permease | EDI29_10750 | Not Available | Positive | 2384078 - 2384851 | 27684.7 |
| abc transporter atp-binding protein | EDI29_10755 | Not Available | Positive | 2384848 - 2385651 | 29656.1 |
| d-cysteine desulfhydrase | EDI29_10760 | Not Available | Positive | 2385673 - 2386686 | 36075.4 |
| aspartate/glutamate racemase family protein | EDI29_10765 | Not Available | Positive | 2386683 - 2387399 | 25796.1 |
| anaerobic c4-dicarboxylate transporter | EDI29_10770 | Not Available | Negative | 2387443 - 2388783 | 47890.2 |
| peptidase | EDI29_10775 | Not Available | Negative | 2389522 - 2390877 | 50811.7 |
| hlyd family type i secretion periplasmic adaptor subunit | EDI29_10780 | Not Available | Negative | 2390880 - 2392238 | 49496.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
