Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pectate lyase | EDI29_10635 | Not Available | Positive | 2354627 - 2355571 | 33584.3 |
| aspartate/glutamate racemase family protein | EDI29_10640 | Not Available | Negative | 2355741 - 2356457 | 26542.0 |
| hth-type transcriptional regulator | EDI29_10645 | Not Available | Positive | 2356680 - 2357579 | 34327.1 |
| dicarboxylate/amino acid:cation symporter | EDI29_10650 | Not Available | Negative | 2357654 - 2358961 | 47094.6 |
| formate dehydrogenase subunit alpha | EDI29_10655 | Not Available | Negative | 2359888 - 2362038 | 79104.5 |
| methyl-accepting chemotaxis protein | EDI29_10660 | Not Available | Positive | 2362576 - 2364255 | 60755.2 |
| ftr1 family iron permease | EDI29_10665 | Not Available | Positive | 2364805 - 2366709 | 70512.5 |
| iron transporter | EDI29_10670 | Not Available | Positive | 2366833 - 2367360 | 18911.7 |
| duf2318 domain-containing protein | EDI29_10675 | Not Available | Positive | 2367538 - 2368935 | 51094.8 |
| abc transporter permease | EDI29_10680 | Not Available | Positive | 2368938 - 2370227 | 46340.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
