Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-deoxy-glucuronate isomerase | EDI29_10480 | Not Available | Positive | 2319841 - 2320671 | 31437.6 |
| hypothetical protein | EDI29_10485 | Not Available | Positive | 2320835 - 2321149 | 11677.3 |
| hypothetical protein | EDI29_10490 | Not Available | Positive | 2321059 - 2321562 | 19201.3 |
| hypothetical protein | EDI29_10495 | Not Available | Positive | 2321589 - 2321924 | 12300.6 |
| abc transporter atp-binding protein | EDI29_10500 | Not Available | Negative | 2322007 - 2322681 | 24465.5 |
| iron abc transporter permease | EDI29_10505 | Not Available | Negative | 2322703 - 2324400 | 60633.0 |
| fe(3+) abc transporter substrate-binding protein | EDI29_10510 | Not Available | Negative | 2324384 - 2325433 | 37751.3 |
| prd domain-containing protein | EDI29_10515 | Not Available | Negative | 2325668 - 2326507 | 32183.9 |
| glycosyl hydrolase family protein | EDI29_10520 | Not Available | Negative | 2326572 - 2328035 | 55595.6 |
| pts beta-glucoside transporter subunit iibca | EDI29_10525 | Not Available | Negative | 2328035 - 2329900 | 66443.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
