Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murr/rpir family transcriptional regulator | EDI29_10430 | Not Available | Negative | 2305325 - 2306182 | 31667.8 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | EDI29_10435 | Not Available | Positive | 2306510 - 2308021 | 54283.2 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) | EDI29_10440 | Not Available | Positive | 2308208 - 2310139 | 70270.8 |
| inositol 2-dehydrogenase | EDI29_10445 | Not Available | Positive | 2310893 - 2311879 | 35873.8 |
| sugar abc transporter substrate-binding protein | EDI29_10450 | Not Available | Positive | 2311960 - 2312898 | 33039.4 |
| sugar abc transporter atp-binding protein | EDI29_10455 | Not Available | Positive | 2312965 - 2314512 | 56498.3 |
| abc transporter permease | EDI29_10460 | Not Available | Positive | 2314525 - 2315556 | 36645.7 |
| gfo/idh/moca family oxidoreductase | EDI29_10465 | Not Available | Positive | 2315597 - 2316730 | 40964.8 |
| 5-dehydro-2-deoxygluconokinase | EDI29_10470 | Not Available | Positive | 2316926 - 2318830 | 70339.7 |
| myo-inosose-2 dehydratase | EDI29_10475 | Not Available | Positive | 2318864 - 2319754 | 32728.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
