Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yjbf family lipoprotein | EDI29_10380 | Not Available | Positive | 2293328 - 2293987 | 24316.2 |
| hypothetical protein | EDI29_10385 | Not Available | Positive | 2293997 - 2294779 | 28638.1 |
| yjbh domain-containing protein | EDI29_10390 | Not Available | Positive | 2294776 - 2296899 | 78901.4 |
| chorismate mutase | EDI29_10395 | Not Available | Positive | 2297290 - 2297847 | 20883.2 |
| peptidase s53 | EDI29_10400 | Not Available | Positive | 2297867 - 2299483 | 58177.8 |
| glycoside hydrolase family 1 protein | EDI29_10405 | Not Available | Positive | 2299795 - 2301219 | 54042.5 |
| prd domain-containing protein | EDI29_10410 | Not Available | Positive | 2301315 - 2302151 | 31460.2 |
| diguanylate cyclase adra | EDI29_10415 | Not Available | Positive | 2302375 - 2303436 | 39696.1 |
| extracellular solute-binding protein | EDI29_10420 | Not Available | Negative | 2303553 - 2304656 | 41171.4 |
| antibiotic biosynthesis monooxygenase | EDI29_10425 | Not Available | Negative | 2304973 - 2305278 | 11768.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
