Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 25 protein | EDI29_10320 | Not Available | Positive | 2282825 - 2283619 | 30888.4 |
| glycosyltransferase family 2 protein | EDI29_10325 | Not Available | Positive | 2283732 - 2284511 | 30249.8 |
| hypothetical protein | EDI29_10330 | Not Available | Positive | 2284651 - 2285439 | 30058.8 |
| isas1 family transposase | EDI29_10335 | Not Available | Negative | 2285505 - 2285891 | 14718.7 |
| dtdp-4-dehydrorhamnose reductase | EDI29_10350 | Not Available | Negative | 2287443 - 2288288 | 31005.7 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | EDI29_10355 | Not Available | Negative | 2288285 - 2288821 | 20382.3 |
| glucose-1-phosphate thymidylyltransferase | EDI29_10360 | Not Available | Negative | 2288823 - 2289692 | 32319.1 |
| galu regulator galf | EDI29_10365 | Not Available | Positive | 2289977 - 2290873 | 32546.5 |
| nadp-dependent phosphogluconate dehydrogenase | EDI29_10370 | Not Available | Positive | 2291104 - 2292510 | 51552.2 |
| hypothetical protein | EDI29_10375 | Not Available | Positive | 2292956 - 2293234 | 8176.55 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
