Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-threonine 3-dehydrogenase | EDI29_10270 | Not Available | Negative | 2272599 - 2273630 | 37637.6 |
| glycine c-acetyltransferase | EDI29_10275 | Not Available | Negative | 2273641 - 2274837 | 43372.1 |
| hypothetical protein | EDI29_10280 | Not Available | Negative | 2274880 - 2275080 | 7251.96 |
| adp-glyceromanno-heptose 6-epimerase | EDI29_10285 | Not Available | Positive | 2275079 - 2276011 | 34812.6 |
| adp-heptose--lps heptosyltransferase rfaf | EDI29_10290 | Not Available | Positive | 2276035 - 2277102 | 39391.6 |
| lipopolysaccharide heptosyltransferase rfac | EDI29_10295 | Not Available | Positive | 2277099 - 2278082 | 36915.3 |
| o-antigen ligase family protein | EDI29_10300 | Not Available | Positive | 2278110 - 2279363 | 46534.6 |
| lipopolysaccharide core heptosyltransferase rfaq | EDI29_10305 | Not Available | Positive | 2279557 - 2280627 | 40857.5 |
| glycosyltransferase family 1 protein | EDI29_10310 | Not Available | Positive | 2280624 - 2281739 | 42250.2 |
| lipopolysaccharide 3-alpha-galactosyltransferase | EDI29_10315 | Not Available | Positive | 2281803 - 2282822 | 39483.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
