Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4132 domain-containing protein | EDI29_10170 | Not Available | Negative | 2242365 - 2246114 | 142869.0 |
| phosphoenolpyruvate carboxylase | EDI29_10175 | Not Available | Positive | 2246674 - 2249313 | 98607.5 |
| duf1266 domain-containing protein | EDI29_10180 | Not Available | Negative | 2249388 - 2250086 | 26707.6 |
| tetratricopeptide repeat protein | EDI29_10185 | Not Available | Negative | 2250083 - 2252134 | 79242.9 |
| molecular chaperone hscc | EDI29_10190 | Not Available | Negative | 2252131 - 2253828 | 62416.7 |
| tyrosine-protein phosphatase | EDI29_10195 | Not Available | Negative | 2253973 - 2254761 | 29057.5 |
| uridine phosphorylase | EDI29_10200 | Not Available | Negative | 2254912 - 2255682 | 27213.8 |
| dienelactone hydrolase family protein | EDI29_10205 | Not Available | Positive | 2256010 - 2256837 | 30325.0 |
| hamp domain-containing protein | EDI29_10210 | Not Available | Negative | 2256927 - 2258591 | 59520.4 |
| hamp domain-containing protein | EDI29_10215 | Not Available | Negative | 2259279 - 2260901 | 58048.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
