Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tat pathway signal sequence domain protein | EDI29_10120 | Not Available | Positive | 2226797 - 2229568 | 102265.0 |
| hypothetical protein | EDI29_10125 | Not Available | Positive | 2229568 - 2230296 | 27996.7 |
| lysr family transcriptional regulator | EDI29_10130 | Not Available | Negative | 2230283 - 2231212 | 35148.1 |
| 6-phosphofructokinase | EDI29_10135 | Not Available | Negative | 2231666 - 2232628 | 34989.2 |
| cdf family cation-efflux pump fief | EDI29_10140 | Not Available | Negative | 2232836 - 2233738 | 32815.2 |
| sugar transporter | EDI29_10145 | Not Available | Negative | 2233770 - 2234957 | 42184.6 |
| swim zinc finger family protein | EDI29_10150 | Not Available | Negative | 2235250 - 2237322 | 78224.6 |
| vwa domain-containing protein | EDI29_10155 | Not Available | Negative | 2237319 - 2238458 | 42877.5 |
| 4-aminobutyrate aminotransferase | EDI29_10160 | Not Available | Negative | 2238455 - 2241019 | 96656.1 |
| aaa family atpase | EDI29_10165 | Not Available | Negative | 2241186 - 2242295 | 40737.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
