Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent rna helicase rhlb | EDI29_10020 | Not Available | Positive | 2200216 - 2201508 | 48156.5 |
| exopolyphosphatase | EDI29_10025 | Not Available | Positive | 2201515 - 2203011 | 55805.7 |
| atp-dependent dna helicase rep | EDI29_10030 | Not Available | Negative | 2203032 - 2205053 | 77225.8 |
| peptidylprolyl isomerase | EDI29_10035 | Not Available | Positive | 2205214 - 2205495 | 10264.4 |
| trifunctional transcriptional regulator/proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase | EDI29_10040 | Not Available | Negative | 2205573 - 2209544 | 145375.0 |
| sodium/proline symporter putp | EDI29_10045 | Not Available | Positive | 2209741 - 2211225 | 53622.5 |
| lysr family transcriptional regulator | EDI29_10050 | Not Available | Negative | 2211269 - 2212156 | 32560.3 |
| nadp oxidoreductase | EDI29_10055 | Not Available | Positive | 2212258 - 2212911 | 23383.2 |
| ketol-acid reductoisomerase | EDI29_10060 | Not Available | Negative | 2213005 - 2214483 | 53738.6 |
| hth-type transcriptional activator ilvy | EDI29_10065 | Not Available | Positive | 2214687 - 2215577 | 33165.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
