Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid iii flippase wzxe | EDI29_09970 | Not Available | Negative | 2188709 - 2189959 | 44965.5 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | EDI29_09975 | Not Available | Negative | 2189961 - 2191091 | 42171.6 |
| dtdp-4-amino-4,6-dideoxy-d-galactose acyltransferase | EDI29_09980 | Not Available | Negative | 2191096 - 2191827 | 26743.9 |
| dtdp-glucose 4,6-dehydratase | EDI29_09985 | Not Available | Negative | 2191866 - 2192933 | 39788.8 |
| udp-n-acetyl-d-mannosamine dehydrogenase | EDI29_09990 | Not Available | Negative | 2192930 - 2194192 | 45693.2 |
| udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing) | EDI29_09995 | Not Available | Negative | 2194310 - 2195440 | 42065.6 |
| eca polysaccharide chain length modulation protein | EDI29_10000 | Not Available | Negative | 2195508 - 2196554 | 39184.8 |
| udp-n-acetylglucosamine--undecaprenyl-phosphate n-acetylglucosaminephosphotransferase | EDI29_10005 | Not Available | Negative | 2196576 - 2197673 | 41064.8 |
| transcription termination factor rho | EDI29_10010 | Not Available | Negative | 2198019 - 2199278 | 46995.0 |
| thioredoxin trxa | EDI29_10015 | Not Available | Negative | 2199771 - 2200097 | 11721.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
