Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | EDI29_00140 | Not Available | Positive | 20880 - 21653 | 27137.0 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | EDI29_00145 | Not Available | Negative | 22079 - 23302 | 46519.2 |
| dmt family transporter | EDI29_00150 | Not Available | Negative | 23431 - 24306 | 30324.3 |
| alpha/beta hydrolase | EDI29_00155 | Not Available | Positive | 24551 - 25303 | 27403.0 |
| hypothetical protein | EDI29_00160 | Not Available | Positive | 25567 - 27159 | 56995.9 |
| site-specific integrase | EDI29_00165 | Not Available | Positive | 27246 - 28268 | 40439.8 |
| Trna-phe | Not Available | Not Available | Positive | 28458 - 28533 | Not Available |
| ornithine decarboxylase | EDI29_00175 | Not Available | Positive | 29211 - 31364 | 80257.8 |
| Ncrna_class:other | Not Available | Not Available | Positive | 29961 - 30088 | Not Available |
| l-asparagine permease | EDI29_00180 | Not Available | Negative | 31586 - 33037 | 52172.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
