Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rida family protein | EDI29_09565 | Not Available | Positive | 2102699 - 2103064 | 13838.6 |
| valine--trna ligase | EDI29_09570 | Not Available | Negative | 2103159 - 2106014 | 108021.0 |
| dna polymerase iii subunit chi | EDI29_09575 | Not Available | Negative | 2106027 - 2106476 | 16867.9 |
| cytosol aminopeptidase | EDI29_09580 | Not Available | Negative | 2106556 - 2108067 | 55018.3 |
| lipopolysaccharide abc transporter permease lptf | EDI29_09585 | Not Available | Positive | 2108351 - 2109466 | 41170.1 |
| lipopolysaccharide abc transporter permease lptg | EDI29_09590 | Not Available | Positive | 2109466 - 2110542 | 39317.3 |
| Trna-leu | Not Available | Not Available | Positive | 2110755 - 2110839 | Not Available |
| duf4102 domain-containing protein | EDI29_09600 | Not Available | Positive | 2111061 - 2112314 | 48229.1 |
| hypothetical protein | EDI29_09605 | Not Available | Positive | 2112393 - 2113625 | 47186.2 |
| xre family transcriptional regulator | EDI29_09610 | Not Available | Negative | 2113835 - 2114119 | 10046.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
