Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yhch/yjgk/yial family protein | EDI29_09515 | Not Available | Positive | 2092213 - 2092677 | 17068.5 |
| helix-turn-helix transcriptional regulator | EDI29_09520 | Not Available | Positive | 2093046 - 2093689 | 24886.9 |
| luxr family transcriptional regulator | EDI29_09525 | Not Available | Positive | 2093700 - 2094275 | 21960.6 |
| ornithine carbamoyltransferase | EDI29_09530 | Not Available | Negative | 2094423 - 2095430 | 36908.1 |
| ribonuclease e inhibitor rrab | EDI29_09535 | Not Available | Positive | 2095592 - 2096017 | 16019.0 |
| gnat family n-acetyltransferase | EDI29_09540 | Not Available | Negative | 2096083 - 2096586 | 18249.8 |
| duf898 domain-containing protein | EDI29_09545 | Not Available | Positive | 2096881 - 2098062 | 43517.4 |
| peptidase m48 | EDI29_09550 | Not Available | Positive | 2098079 - 2099116 | 38829.9 |
| alpha/beta fold hydrolase | EDI29_09555 | Not Available | Positive | 2099456 - 2100535 | 39898.9 |
| hamp domain-containing protein | EDI29_09560 | Not Available | Positive | 2100939 - 2102558 | 58053.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
