Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i-e crispr-associated protein cas7/cse4/casc | EDI29_09410 | Not Available | Positive | 2074337 - 2075404 | 38959.9 |
| type i-e crispr-associated protein cas5/casd | EDI29_09415 | Not Available | Positive | 2075414 - 2076148 | 27659.7 |
| type i-e crispr-associated protein cas6/cse3/case | EDI29_09420 | Not Available | Positive | 2076148 - 2076795 | 24353.1 |
| type i-e crispr-associated endonuclease cas1 | EDI29_09425 | Not Available | Positive | 2076823 - 2077740 | 33186.2 |
| type i-e crispr-associated endoribonuclease cas2 | EDI29_09430 | Not Available | Positive | 2077741 - 2078034 | 11106.4 |
| xre family transcriptional regulator | EDI29_09435 | Not Available | Negative | 2078525 - 2078896 | 13891.5 |
| type ii toxin-antitoxin system rele/pare family toxin | EDI29_09440 | Not Available | Negative | 2078970 - 2079230 | 10179.4 |
| helix-turn-helix domain-containing protein | EDI29_09445 | Not Available | Positive | 2079467 - 2079883 | 15423.5 |
| hypothetical protein | EDI29_09450 | Not Available | Negative | 2080095 - 2080604 | 18288.2 |
| hypothetical protein | EDI29_09460 | Not Available | Positive | 2081785 - 2082243 | 16160.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
