Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3829 domain-containing protein | EDI29_09360 | Not Available | Negative | 2059744 - 2060763 | 37573.1 |
| laci family dna-binding transcriptional regulator | EDI29_09365 | Not Available | Negative | 2061238 - 2062257 | 38228.1 |
| sucrose-6-phosphate hydrolase | EDI29_09370 | Not Available | Negative | 2062288 - 2063697 | 53706.4 |
| pts sucrose transporter subunit iibc | EDI29_09375 | Not Available | Negative | 2063697 - 2065067 | 47788.7 |
| carbohydrate porin | EDI29_09380 | Not Available | Negative | 2065147 - 2066682 | 56538.4 |
| aminoimidazole riboside kinase | EDI29_09385 | Not Available | Negative | 2066868 - 2067803 | 34549.4 |
| polymer-forming cytoskeletal family protein | EDI29_09390 | Not Available | Positive | 2068275 - 2068826 | 19448.9 |
| crispr-associated helicase cas3' | EDI29_09395 | Not Available | Positive | 2068854 - 2071571 | 102269.0 |
| type i-e crispr-associated protein cse1/casa | EDI29_09400 | Not Available | Positive | 2072146 - 2073714 | 58815.0 |
| type i-e crispr-associated protein cse2/casb | EDI29_09405 | Not Available | Positive | 2073698 - 2074333 | 23640.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
