Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | EDI29_09310 | Not Available | Positive | 2048431 - 2049396 | 35866.4 |
| deda family protein | EDI29_09315 | Not Available | Negative | 2049426 - 2050085 | 24496.9 |
| cystathionine beta-lyase | EDI29_09320 | Not Available | Negative | 2050416 - 2051606 | 43221.8 |
| carotenoid oxygenase family protein | EDI29_09325 | Not Available | Negative | 2051943 - 2053394 | 54545.3 |
| tetr/acrr family transcriptional regulator | EDI29_09330 | Not Available | Positive | 2053658 - 2054266 | 22648.5 |
| trap transporter large permease | EDI29_09335 | Not Available | Negative | 2054405 - 2055697 | 46190.6 |
| trap transporter small permease | EDI29_09340 | Not Available | Negative | 2055713 - 2056219 | 18772.7 |
| trap transporter substrate-binding protein | EDI29_09345 | Not Available | Negative | 2056437 - 2057414 | 36192.9 |
| biopolymer transporter exbb | EDI29_09350 | Not Available | Positive | 2058088 - 2059092 | 34813.9 |
| tonb system transport protein exbd | EDI29_09355 | Not Available | Positive | 2059096 - 2059521 | 15370.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
