Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rele/pare family toxin | EDI29_09155 | Not Available | Positive | 2016805 - 2017092 | 10940.5 |
| 4,5-dopa dioxygenase extradiol | EDI29_09160 | Not Available | Positive | 2017269 - 2018054 | 28658.1 |
| sel1 repeat family protein | EDI29_09165 | Not Available | Negative | 2018110 - 2018673 | 20706.6 |
| glutathionylspermidine synthase family protein | EDI29_09170 | Not Available | Negative | 2018826 - 2019986 | 44965.0 |
| duf1190 family protein | EDI29_09175 | Not Available | Negative | 2019998 - 2020666 | 23346.5 |
| outer membrane channel protein tolc | EDI29_09180 | Not Available | Negative | 2020950 - 2022344 | 50950.4 |
| adp-ribose diphosphatase | EDI29_09185 | Not Available | Positive | 2022683 - 2023315 | 23659.0 |
| duf1249 family protein | EDI29_09190 | Not Available | Positive | 2023317 - 2023751 | 17025.8 |
| 3',5'-cyclic-amp phosphodiesterase | EDI29_09195 | Not Available | Positive | 2023859 - 2024686 | 30986.8 |
| esterase yqia | EDI29_09200 | Not Available | Positive | 2024686 - 2025267 | 21673.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
