Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aerobic respiration two-component sensor histidine kinase arcb | EDI29_09100 | Not Available | Positive | 2005696 - 2008065 | 89476.1 |
| isoprenoid biosynthesis protein elbb | EDI29_09105 | Not Available | Positive | 2008560 - 2009213 | 22883.7 |
| monofunctional biosynthetic peptidoglycan transglycosylase | EDI29_09110 | Not Available | Positive | 2009210 - 2009944 | 27740.9 |
| alginate lyase | EDI29_09115 | Not Available | Positive | 2010017 - 2011312 | 48771.9 |
| osmotically-inducible protein osmy | EDI29_09120 | Not Available | Negative | 2011417 - 2011989 | 19858.8 |
| dnaa initiator-associating protein diaa | EDI29_09125 | Not Available | Negative | 2012001 - 2012591 | 21038.3 |
| yran family protein | EDI29_09130 | Not Available | Negative | 2012633 - 2013028 | 14512.3 |
| penicillin-binding protein activator | EDI29_09135 | Not Available | Negative | 2012986 - 2015004 | 72132.0 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | EDI29_09140 | Not Available | Positive | 2015066 - 2015953 | 32194.4 |
| plasmid stabilization protein | EDI29_09150 | Not Available | Positive | 2016561 - 2016815 | 9179.92 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
