Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | EDI29_08695 | Not Available | Positive | 1924000 - 1925175 | 43678.9 |
| abc transporter permease | EDI29_08700 | Not Available | Positive | 1925185 - 1926321 | 42071.6 |
| hypothetical protein | EDI29_08705 | Not Available | Positive | 1926461 - 1926850 | 12709.3 |
| amino acid abc transporter atp-binding protein | EDI29_08715 | Not Available | Negative | 1927353 - 1928114 | 28689.8 |
| amino acid abc transporter permease | EDI29_08720 | Not Available | Negative | 1928123 - 1929217 | 41169.2 |
| amino acid abc transporter permease | EDI29_08725 | Not Available | Negative | 1929227 - 1930405 | 43344.8 |
| amino acid abc transporter substrate-binding protein | EDI29_08730 | Not Available | Negative | 1930471 - 1931496 | 37001.2 |
| amino acid abc transporter permease | EDI29_08735 | Not Available | Negative | 1931863 - 1932528 | 24524.7 |
| amino acid abc transporter substrate-binding protein | EDI29_08740 | Not Available | Negative | 1932742 - 1933509 | 27627.7 |
| endonuclease | EDI29_08745 | Not Available | Positive | 1933796 - 1934941 | 43523.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
