Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isopentenyl-diphosphate delta-isomerase | EDI29_08545 | Not Available | Negative | 1888668 - 1889207 | 20507.2 |
| beta-glucosidase bglx | EDI29_08550 | Not Available | Negative | 1889330 - 1891636 | 84239.7 |
| aspartate aminotransferase family protein | EDI29_08555 | Not Available | Negative | 1891999 - 1893345 | 48699.0 |
| abc transporter substrate-binding protein | EDI29_08560 | Not Available | Positive | 1893760 - 1894779 | 36714.8 |
| abc transporter atp-binding protein | EDI29_08565 | Not Available | Positive | 1894857 - 1895867 | 37220.0 |
| abc transporter permease subunit | EDI29_08570 | Not Available | Positive | 1895864 - 1897516 | 59781.8 |
| deor/glpr transcriptional regulator | EDI29_08575 | Not Available | Positive | 1897548 - 1898318 | 27681.5 |
| glutathione s-transferase family protein | EDI29_08580 | Not Available | Positive | 1898466 - 1899152 | 25359.2 |
| d-alanyl-d-alanine endopeptidase | EDI29_08585 | Not Available | Negative | 1899227 - 1900174 | 34575.9 |
| hypothetical protein | EDI29_08590 | Not Available | Negative | 1900307 - 1900834 | 19669.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
