Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine abc transporter substrate-binding protein glnh | EDI29_08380 | Not Available | Positive | 1856521 - 1857267 | 27270.7 |
| glutamine abc transporter permease glnp | EDI29_08385 | Not Available | Positive | 1857294 - 1857953 | 24140.6 |
| glutamine abc transporter atp-binding protein glnq | EDI29_08390 | Not Available | Positive | 1857950 - 1858672 | 26534.2 |
| peptidase m3 | EDI29_08395 | Not Available | Negative | 1858724 - 1860589 | 70628.6 |
| dna-binding protein ybib | EDI29_08400 | Not Available | Negative | 1860676 - 1861644 | 35079.5 |
| proteinase inhibitor | EDI29_08520 | Not Available | Negative | 1882214 - 1882525 | 11285.4 |
| serine 3-dehydrogenase | EDI29_08525 | Not Available | Negative | 1882629 - 1884059 | 51256.1 |
| atp-dependent dna helicase ding | EDI29_08530 | Not Available | Negative | 1884570 - 1886669 | 79714.0 |
| arac family transcriptional regulator | EDI29_08535 | Not Available | Positive | 1886851 - 1887684 | 31907.7 |
| lyse family translocator | EDI29_08540 | Not Available | Positive | 1887737 - 1888384 | 23685.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
