Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2058 domain-containing protein | EDI29_08330 | Not Available | Positive | 1847276 - 1847815 | 20311.4 |
| cold shock domain-containing protein | EDI29_08335 | Not Available | Positive | 1848109 - 1848591 | 17803.5 |
| hypothetical protein | EDI29_08340 | Not Available | Negative | 1848818 - 1849147 | 12572.8 |
| duf2892 domain-containing protein | EDI29_08345 | Not Available | Negative | 1849202 - 1849738 | 19322.8 |
| emmdr/yeeo family multidrug/toxin efflux mate transporter | EDI29_08350 | Not Available | Positive | 1850112 - 1851515 | 51002.7 |
| mfs transporter | EDI29_08355 | Not Available | Negative | 1851559 - 1852728 | 41643.8 |
| outer membrane protein ompx | EDI29_08360 | Not Available | Negative | 1852987 - 1853502 | 18205.1 |
| threonine/homoserine exporter rhta | EDI29_08365 | Not Available | Positive | 1853880 - 1854761 | 31255.4 |
| aaa family atpase | EDI29_08370 | Not Available | Negative | 1854758 - 1855309 | 21983.1 |
| dna starvation/stationary phase protection protein dps | EDI29_08375 | Not Available | Positive | 1855620 - 1856123 | 18460.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
