Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp-binding protein | EDI29_08170 | Not Available | Positive | 1817743 - 1818744 | 36889.1 |
| phosphatase pap2 family protein | EDI29_08175 | Not Available | Positive | 1818783 - 1819484 | 25917.2 |
| bifunctional murein dd-endopeptidase/murein ld-carboxypeptidase | EDI29_08180 | Not Available | Positive | 1819807 - 1820388 | 21858.1 |
| abc transporter substrate-binding protein | EDI29_08185 | Not Available | Positive | 1820762 - 1822570 | 69057.5 |
| microcin c abc transporter permease yejb | EDI29_08190 | Not Available | Positive | 1822580 - 1823677 | 40638.1 |
| abc transporter permease subunit | EDI29_08195 | Not Available | Positive | 1823674 - 1824699 | 38323.9 |
| microcin c abc transporter atp-binding protein yejf | EDI29_08200 | Not Available | Positive | 1824701 - 1826293 | 59247.9 |
| hypothetical protein | EDI29_08205 | Not Available | Negative | 1826356 - 1826700 | 12860.3 |
| bcr/cfla family drug resistance efflux transporter | EDI29_08210 | Not Available | Negative | 1827083 - 1828273 | 43130.2 |
| 16s rrna pseudouridine(516) synthase rsua | EDI29_08215 | Not Available | Negative | 1828314 - 1829009 | 26152.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
