Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine abc transporter permease artm | EDI29_07920 | Not Available | Positive | 1763435 - 1764103 | 24666.0 |
| arginine abc transporter substrate-binding protein | EDI29_07925 | Not Available | Positive | 1764442 - 1765173 | 26713.8 |
| 23s rrna (uracil(747)-c(5))-methyltransferase rlmc | EDI29_07930 | Not Available | Negative | 1765518 - 1766651 | 42298.3 |
| duf2593 family protein | EDI29_07935 | Not Available | Negative | 1766766 - 1767218 | 16610.0 |
| putrescine abc transporter permease poti | EDI29_07940 | Not Available | Negative | 1767426 - 1768271 | 30940.0 |
| putrescine abc transporter permease poth | EDI29_07945 | Not Available | Negative | 1768268 - 1769233 | 36405.7 |
| putrescine abc transporter atp-binding subunit potg | EDI29_07950 | Not Available | Negative | 1769248 - 1770381 | 42028.2 |
| spermidine/putrescine abc transporter substrate-binding protein potf | EDI29_07955 | Not Available | Negative | 1770586 - 1771695 | 40766.6 |
| ybjn domain-containing protein | EDI29_07960 | Not Available | Negative | 1772063 - 1772542 | 17664.3 |
| 30s ribosomal protein s6--l-glutamate ligase | EDI29_07965 | Not Available | Negative | 1772823 - 1773734 | 32816.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
