Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucine-responsive transcriptional regulator lrp | EDI29_07815 | Not Available | Negative | 1741204 - 1741698 | 18873.9 |
| thioredoxin-disulfide reductase | EDI29_07820 | Not Available | Positive | 1742281 - 1743243 | 34470.0 |
| cysteine/glutathione abc transporter permease/atp-binding protein cydd | EDI29_07825 | Not Available | Positive | 1743480 - 1745246 | 64710.0 |
| cysteine/glutathione abc transporter atp-binding protein/permease cydc | EDI29_07830 | Not Available | Positive | 1745246 - 1746985 | 63546.2 |
| leucyl/phenylalanyl-trna--protein transferase | EDI29_07835 | Not Available | Positive | 1747020 - 1747724 | 26280.2 |
| translation initiation factor if-1 | EDI29_07840 | Not Available | Positive | 1747838 - 1748056 | 8236.07 |
| phenazine biosynthesis protein | EDI29_07845 | Not Available | Positive | 1748318 - 1748698 | 14249.9 |
| atp-dependent clp protease atp-binding subunit clpa | EDI29_07850 | Not Available | Negative | 1748824 - 1751097 | 84138.7 |
| atp-dependent clp protease adaptor clps | EDI29_07855 | Not Available | Negative | 1751127 - 1751447 | 12164.4 |
| cold shock-like protein cspd | EDI29_07865 | Not Available | Positive | 1751994 - 1752215 | 7970.52 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
