Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate formate lyase 1-activating protein | EDI29_07765 | Not Available | Positive | 1726526 - 1727266 | 28098.7 |
| hydantoinase/oxoprolinase family protein | EDI29_07770 | Not Available | Negative | 1727350 - 1728918 | 56196.6 |
| duf917 domain-containing protein | EDI29_07775 | Not Available | Negative | 1728929 - 1730038 | 39464.6 |
| cytosine permease | EDI29_07780 | Not Available | Negative | 1730065 - 1731396 | 47651.1 |
| lysr family transcriptional regulator | EDI29_07785 | Not Available | Positive | 1731671 - 1732612 | 34901.0 |
| mfs transporter | EDI29_07790 | Not Available | Negative | 1732598 - 1733752 | 41529.7 |
| serine--trna ligase | EDI29_07795 | Not Available | Negative | 1734068 - 1735363 | 48772.3 |
| replication-associated recombination protein a | EDI29_07800 | Not Available | Negative | 1735468 - 1736811 | 49407.8 |
| outer membrane lipoprotein chaperone lola | EDI29_07805 | Not Available | Negative | 1736819 - 1737430 | 22529.2 |
| cell division protein ftsk | EDI29_07810 | Not Available | Negative | 1737679 - 1741089 | 124170.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
