Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase family protein | EDI29_07260 | Not Available | Positive | 1618500 - 1619459 | 36443.8 |
| u32 family peptidase | EDI29_07265 | Not Available | Positive | 1619654 - 1621015 | 51344.2 |
| lipid kinase yegs | EDI29_07270 | Not Available | Positive | 1621508 - 1622407 | 32448.0 |
| phosphate-starvation-inducible protein psie | EDI29_07275 | Not Available | Negative | 1622436 - 1622843 | 15261.2 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | EDI29_07280 | Not Available | Negative | 1623022 - 1623825 | 28835.6 |
| hydroxyethylthiazole kinase | EDI29_07285 | Not Available | Negative | 1623822 - 1624616 | 27449.8 |
| hypothetical protein | EDI29_07290 | Not Available | Negative | 1624951 - 1625229 | 10665.7 |
| nad(p)-dependent alcohol dehydrogenase | EDI29_07295 | Not Available | Positive | 1625697 - 1626716 | 36192.5 |
| ggdef domain-containing protein | EDI29_07300 | Not Available | Positive | 1626870 - 1627778 | 34815.1 |
| alcohol dehydrogenase adhp | EDI29_07305 | Not Available | Positive | 1628012 - 1629022 | 35358.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
