Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative motility protein | EDI29_07110 | Not Available | Positive | 1580894 - 1581082 | 6383.65 |
| type ii toxin-antitoxin system hipa family toxin | EDI29_07115 | Not Available | Positive | 1581283 - 1582614 | 50313.1 |
| helix-turn-helix domain-containing protein | EDI29_07120 | Not Available | Positive | 1582611 - 1582928 | 12011.7 |
| duf2633 family protein | EDI29_07125 | Not Available | Positive | 1583069 - 1583284 | 8195.11 |
| organic hydroperoxide resistance protein | EDI29_07130 | Not Available | Negative | 1583466 - 1583891 | 14500.4 |
| marr family transcriptional regulator | EDI29_07135 | Not Available | Negative | 1584051 - 1584500 | 16925.7 |
| magnesium transporter | EDI29_07140 | Not Available | Positive | 1584720 - 1586198 | 54370.1 |
| type ii toxin-antitoxin system hica family toxin | EDI29_07145 | Not Available | Positive | 1586314 - 1586496 | 6724.35 |
| hypothetical protein | EDI29_07150 | Not Available | Positive | 1586661 - 1587098 | 15872.2 |
| galactokinase | EDI29_07155 | Not Available | Negative | 1587140 - 1588303 | 42167.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
